bio3d

R 패키지 메타데이터와 수집 신호를 모아 봅니다.

Packages / CRAN / bio3d

bio3d

v2.4-5
Repository CRANLicense GPL (>= 2)Lifecycle activeNeeds compilation yes
Package pageReferenceSourceDOIREADMENEWS
DOI
10.32614/CRAN.package.bio3d
Task views
Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics
Reverse imports
366
Reverse depends
53

Core Signals

첫 화면에서 판단해야 할 수집 신호를 먼저 배치합니다.

3
Task views
Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics
Reverse imports
366
Reverse depends
53

Supported Backends

DESCRIPTION에서 감지한 backend 관련 package입니다.

0
backend package 신호가 없습니다.

Quick Facts

기본 메타데이터를 작은 카드와 토큰으로 압축합니다.

profile
Repository
CRAN
Version
2.4-5
License
GPL (>= 2)
Lifecycle
active
Needs compilation
yes
Reverse depends
53
Reverse imports
366
Last observed
2026-06-04
CRAN
cran.r-project.org/package=bio3d

Build fields

LinkingTo
1
Rcpp

수집 소스별 패키지 정보

1개 소스
CRAN
2.4-5
2026-06-04
License
GPL (>= 2)
Depends
R (>= 3.1.0)
Imports
Rcpp, parallel, grid, graphics, grDevices, stats, utils
Suggests
XML, RCurl, lattice, ncdf4, igraph, bigmemory, knitr, rmarkdown, testthat (>= 0.9.1), httr, msa, Biostrings
LinkingTo
Rcpp
Needs compilation
yes
Reverse depends
53
Reverse imports
366
Lifecycle
active
Last observed
2026-06-04 01:07:22

이 패키지가 의존하는 패키지

5개 표시전체 20개
PackageTypeSpec
graphics
CRAN · 2.4-5 · 2026-06-04
Importsgraphics
grDevices
CRAN · 2.4-5 · 2026-06-04
ImportsgrDevices
grid
CRAN · 2.4-5 · 2026-06-04
Importsgrid
parallel
CRAN · 2.4-5 · 2026-06-04
Importsparallel
Rcpp
CRAN · 2.4-5 · 2026-06-04
ImportsRcpp
1 / 4

이 패키지를 쓰는 패키지

5개 표시전체 10개
PackageTypeSpec
Bios2cor
2.2.2
CRAN · 2026-06-04
Dependsbio3d
aLFQ
1.3.6
CRAN · 2026-05-14
Importsbio3d
compas
0.1.1
CRAN · 2026-06-04
Importsbio3d
EnvNJ
0.1.3
CRAN · 2026-06-04
Importsbio3d
orthGS
0.1.8
CRAN · 2026-06-04
Importsbio3d
1 / 2

Reverse dependency summary

3 types
TypePackages
Depends1
Imports8
Suggests1

패키지 페이지

Reverse depends
2
Reverse imports
14
Reverse suggests
8
All links
55
Repository
CRAN
Version
2.4-5
Collected
2026-05-21 07:06:20
Package page
https://cran.r-project.org/web/packages/bio3d/index.html
DOI
10.32614/CRAN.package.bio3d
Citation
https://cran.r-project.org/web/packages/bio3d/citation.html
CRAN checks
https://cran.r-project.org/web/checks/check_results_bio3d.html
README
https://cran.r-project.org/web/packages/bio3d/readme/README.html
NEWS
https://cran.r-project.org/web/packages/bio3d/news/news.html
Reference HTML
https://cran.r-project.org/web/packages/bio3d/refman/bio3d.html
Reference PDF
https://cran.r-project.org/web/packages/bio3d/bio3d.pdf
Source package
https://cran.r-project.org/src/contrib/bio3d_2.4-5.tar.gz
Archive
https://CRAN.R-project.org/src/contrib/Archive/bio3d
In views
Omics
Page fields
Author
Barry Grant [aut, cre], Xin-Qiu Yao [aut], Lars Skjaerven [aut], Julien Ide [aut]
CRAN Checks
bio3d results
Citation
bio3d citation info
DOI
10.32614/CRAN.package.bio3d
In Views
Omics
License
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
LinkingTo
Rcpp
Maintainer
Barry Grant <bjgrant at ucsd.edu>
Materials
README , NEWS
NeedsCompilation
yes
Old Sources
bio3d archive
Package Source
bio3d_2.4-5.tar.gz
Published
2024-10-29
Reference Manual
bio3d.html , bio3d.pdf
Reverse Depends
Bios2cor
Reverse Imports
compas , EnvNJ , orthGS , ptm , r3dmol , rPDBapi , SOMMD
Reverse Suggests
AlphaMissenseR , AntibodyForests , factR , ProteinGymR
URL
http://thegrantlab.org/bio3d/ , https://bitbucket.org/Grantlab/bio3d/
Version
2.4-5
Vignettes
bio3d Vignettes ( source )
Windows Binaries
r-devel: bio3d_2.4-5.zip , r-release: bio3d_2.4-5.zip , r-oldrel: bio3d_2.4-5.zip
MacOS Binaries
r-release (arm64): bio3d_2.4-5.tgz , r-oldrel (arm64): bio3d_2.4-5.tgz , r-release (x86_64): bio3d_2.4-5.tgz , r-oldrel (x86_64): bio3d_2.4-5.tgz
Version
2.4-5
LinkingTo
Rcpp
Rcpp
Published
2024-10-29
DOI
10.32614/CRAN.package.bio3d
10.32614/CRAN.package.bio3d
Author
Barry Grant [aut, cre], Xin-Qiu Yao [aut], Lars Skjaerven [aut], Julien Ide [aut]
Maintainer
Barry Grant <bjgrant at ucsd.edu>
License
GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
GPL-2GPL-3
URL
http://thegrantlab.org/bio3d/ , https://bitbucket.org/Grantlab/bio3d/
http://thegrantlab.org/bio3d/https://bitbucket.org/Grantlab/bio3d/
NeedsCompilation
yes
Citation
bio3d citation info
bio3d citation info
Materials
README , NEWS
READMENEWS
In Views
Omics
Omics
CRAN Checks
bio3d results
bio3d results
Reference Manual
bio3d.html , bio3d.pdf
bio3d.htmlbio3d.pdf
Vignettes
bio3d Vignettes ( source )
bio3d Vignettessource
Package Source
bio3d_2.4-5.tar.gz
bio3d_2.4-5.tar.gz
Windows Binaries
r-devel: bio3d_2.4-5.zip , r-release: bio3d_2.4-5.zip , r-oldrel: bio3d_2.4-5.zip
bio3d_2.4-5.zipbio3d_2.4-5.zipbio3d_2.4-5.zip
MacOS Binaries
r-release (arm64): bio3d_2.4-5.tgz , r-oldrel (arm64): bio3d_2.4-5.tgz , r-release (x86_64): bio3d_2.4-5.tgz , r-oldrel (x86_64): bio3d_2.4-5.tgz
bio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgz
Old Sources
bio3d archive
bio3d archive
Reverse Depends
Bios2cor
Bios2cor
Reverse Imports
compas , EnvNJ , orthGS , ptm , r3dmol , rPDBapi , SOMMD
compasEnvNJorthGSptmr3dmolrPDBapiSOMMD
Reverse Suggests
AlphaMissenseR , AntibodyForests , factR , ProteinGymR
AlphaMissenseRAntibodyForestsfactRProteinGymR
Page sections 4
Documentation
Heading
Documentation
Links
[{"label":"bio3d.html","section":"","type":"","url":"https://cran.r-project.org/web/packages/bio3d/refman/bio3d.html"},{"label":"bio3d.pdf","section":"","type":"","url":"https://cran.r-project.org/web/packages/bio3d/bio3d.pdf"},{"label":"bio3d Vignettes","section":"","type":"","url":"https://cran.r-project.org/web/packages/bio3d/vignettes/bio3d_vignettes.html"},{"label":"source","section":"","type":"","url":"https://cran.r-project.org/web/packages/bio3d/vignettes/bio3d_vignettes.Rmd"}]
Text
Reference manual: bio3d.html , bio3d.pdf Vignettes: bio3d Vignettes ( source )
Downloads
Heading
Downloads
Links
[{"label":"bio3d_2.4-5.tar.gz","section":"","type":"","url":"https://cran.r-project.org/src/contrib/bio3d_2.4-5.tar.gz"},{"label":"bio3d_2.4-5.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.7/bio3d_2.4-5.zip"},{"label":"bio3d_2.4-5.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.6/bio3d_2.4-5.zip"},{"label":"bio3d_2.4-5.zip","section":"","type":"","url":"https://cran.r-project.org/bin/windows/contrib/4.5/bio3d_2.4-5.zip"},{"label":"bio3d_2.4-5.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/sonoma-arm64/contrib/4.6/bio3d_2.4-5.tgz"},{"label":"bio3d_2.4-5.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-arm64/contrib/4.5/bio3d_2.4-5.tgz"},{"label":"bio3d_2.4-5.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.6/bio3d_2.4-5.tgz"},{"label":"bio3d_2.4-5.tgz","section":"","type":"","url":"https://cran.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.5/bio3d_2.4-5.tgz"},{"label":"bio3d archive","section":"","type":"","url":"https://CRAN.R-project.org/src/contrib/Archive/bio3d"}]
Text
Package source: bio3d_2.4-5.tar.gz Windows binaries: r-devel: bio3d_2.4-5.zip , r-release: bio3d_2.4-5.zip , r-oldrel: bio3d_2.4-5.zip macOS binaries: r-release (arm64): bio3d_2.4-5.tgz , r-oldrel (arm64): bio3d_2.4-5.tgz , r-release (x86_64): bio3d_2.4-5.tgz , r-oldrel (x86_64): bio3d_2.4-5.tgz Old sources: bio3d archive
Reverse dependencies
Heading
Reverse dependencies
Links
[{"label":"Bios2cor","section":"","type":"","url":"https://cran.r-project.org/web/packages/Bios2cor/index.html"},{"label":"compas","section":"","type":"","url":"https://cran.r-project.org/web/packages/compas/index.html"},{"label":"EnvNJ","section":"","type":"","url":"https://cran.r-project.org/web/packages/EnvNJ/index.html"},{"label":"orthGS","section":"","type":"","url":"https://cran.r-project.org/web/packages/orthGS/index.html"},{"label":"ptm","section":"","type":"","url":"https://cran.r-project.org/web/packages/ptm/index.html"},{"label":"r3dmol","section":"","type":"","url":"https://cran.r-project.org/web/packages/r3dmol/index.html"},{"label":"rPDBapi","section":"","type":"","url":"https://cran.r-project.org/web/packages/rPDBapi/index.html"},{"label":"SOMMD","section":"","type":"","url":"https://cran.r-project.org/web/packages/SOMMD/index.html"},{"label":"AlphaMissenseR","section":"","type":"","url":"https://www.bioconductor.org/packages/release/bioc/html/AlphaMissenseR.html"},{"label":"AntibodyForests","section":"","type":"","url":"https://cran.r-project.org/web/packages/AntibodyForests/index.html"},{"label":"factR","section":"","type":"","url":"https://www.bioconductor.org/packages/release/bioc/html/factR.html"},{"label":"ProteinGymR","section":"","type":"","url":"https://www.bioconductor.org/packages/release/data/experiment/html/ProteinGymR.html"}]
Text
Reverse depends: Bios2cor Reverse imports: compas , EnvNJ , orthGS , ptm , r3dmol , rPDBapi , SOMMD Reverse suggests: AlphaMissenseR , AntibodyForests , factR , ProteinGymR
Linking
Heading
Linking
Links
[{"label":"https://CRAN.R-project.org/package=bio3d","section":"","type":"","url":"https://CRAN.R-project.org/package=bio3d"}]
Text
Please use the canonical form https://CRAN.R-project.org/package=bio3d to link to this page.
Materials 2
READMENEWS
Documentation 4
bio3d.htmlbio3d.pdfbio3d Vignettessource
Vignettes 2
bio3d Vignettessource
Downloads 9
bio3d_2.4-5.tar.gzbio3d_2.4-5.zipbio3d_2.4-5.zipbio3d_2.4-5.zipbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d archive
All page links 55
RcppparallelgridgraphicsgrDevicesstatsutilsXMLRCurllatticencdf4igraphbigmemoryknitrrmarkdowntestthathttrmsaBiostrings10.32614/CRAN.package.bio3dGPL-2GPL-3http://thegrantlab.org/bio3d/https://bitbucket.org/Grantlab/bio3d/bio3d citation infoREADMENEWSOmicsbio3d resultsbio3d.htmlbio3d.pdfbio3d Vignettessourcebio3d_2.4-5.tar.gzbio3d_2.4-5.zipbio3d_2.4-5.zipbio3d_2.4-5.zipbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d_2.4-5.tgzbio3d archiveBios2corcompasEnvNJorthGSptmr3dmolrPDBapiSOMMDAlphaMissenseRAntibodyForestsfactRProteinGymRhttps://CRAN.R-project.org/package=bio3d

버전 이력

RepositoryVersionPublishedFirst seenLast seenDocs
CRAN2.4-42022-10-272026-05-312026-05-31
CRAN2.4-32022-03-102026-05-312026-05-31
CRAN2.4-22021-05-112026-05-312026-05-31
CRAN2.4-12020-01-212026-05-312026-05-31
CRAN2.4-02019-11-262026-05-312026-05-31
CRAN2.3-42018-04-032026-05-312026-05-31
CRAN2.3-32017-07-312026-05-312026-05-31
CRAN2.3-22017-06-152026-05-312026-05-31
CRAN2.3-12016-11-122026-05-312026-05-31
CRAN2.3-02016-09-302026-05-312026-05-31
CRAN2.2-42015-12-122026-05-312026-05-31
CRAN2.2-32015-09-042026-05-312026-05-31
CRAN2.2-22015-03-032026-05-312026-05-31
CRAN2.2-12015-02-272026-05-312026-05-31
CRAN2.1-32014-10-272026-05-312026-05-31
CRAN2.1-22014-10-212026-05-312026-05-31
CRAN2.1-12014-10-152026-05-312026-05-31
CRAN2.4-52026-06-012026-06-04

보안

표시할 OSV 데이터가 없습니다.

문헌 신호

표시할 OpenAlex 데이터가 없습니다.

CRAN Task Views

Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics · 2026-06-04